Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00346Q8IVM7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00346Q8IVM7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00346Q8IVM7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00346Q8IVM7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00346Q8IVM7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00346Q8IVM7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00346Q8IVM7 AL512353.2-201ENST00000448759 1962 ntBASIC16.77■□□□□ 0.27
LINC00346Q8IVM7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00346Q8IVM7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 POU5F1P3-201ENST00000428824 1078 ntBASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 AL031598.1-201ENST00000561511 1773 ntBASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00346Q8IVM7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 Z85996.1-201ENST00000494644 937 ntBASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 WIZP1-201ENST00000531444 2299 ntBASIC16.75■□□□□ 0.27
LINC00346Q8IVM7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 HTR7P1-201ENST00000538670 1336 ntBASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms