Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.02■□□□□ 0.63
PACS2Q86VP3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PACS2Q86VP3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PACS2Q86VP3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PACS2Q86VP3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.02■□□□□ 0.63
PACS2Q86VP3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PACS2Q86VP3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PACS2Q86VP3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PACS2Q86VP3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.01■□□□□ 0.63
PACS2Q86VP3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PACS2Q86VP3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS2Q86VP3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS2Q86VP3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS2Q86VP3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PACS2Q86VP3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.01■□□□□ 0.63
PACS2Q86VP3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PACS2Q86VP3 AC244517.3-201ENST00000616254 1235 ntBASIC19.01■□□□□ 0.63
PACS2Q86VP3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PACS2Q86VP3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS2Q86VP3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PACS2Q86VP3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PACS2Q86VP3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS2Q86VP3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS2Q86VP3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.01■□□□□ 0.63
PACS2Q86VP3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PACS2Q86VP3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19■□□□□ 0.63
PACS2Q86VP3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 AC068338.2-201ENST00000563278 1430 ntBASIC19■□□□□ 0.63
PACS2Q86VP3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19■□□□□ 0.63
PACS2Q86VP3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 UQCRFS1P1-201ENST00000435169 820 ntBASIC19■□□□□ 0.63
PACS2Q86VP3 NCF1B-203ENST00000435988 1254 ntBASIC19■□□□□ 0.63
PACS2Q86VP3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PACS2Q86VP3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19■□□□□ 0.63
PACS2Q86VP3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19■□□□□ 0.63
PACS2Q86VP3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19■□□□□ 0.63
PACS2Q86VP3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PACS2Q86VP3 AC069236.1-201ENST00000604339 616 ntBASIC19■□□□□ 0.63
PACS2Q86VP3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19■□□□□ 0.63
PACS2Q86VP3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PACS2Q86VP3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PACS2Q86VP3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19■□□□□ 0.63
PACS2Q86VP3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19■□□□□ 0.63
PACS2Q86VP3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PACS2Q86VP3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS2Q86VP3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 GPX1P1-201ENST00000388829 606 ntBASIC18.99■□□□□ 0.63
PACS2Q86VP3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 AL162412.1-201ENST00000567129 965 ntBASIC18.99■□□□□ 0.63
PACS2Q86VP3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 AL121832.2-201ENST00000610979 668 ntBASIC18.99■□□□□ 0.63
PACS2Q86VP3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PACS2Q86VP3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS2Q86VP3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 1195.8 ms