Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.89■□□□□ 0.62
LDB1Q86U70 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.89■□□□□ 0.61
LDB1Q86U70 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.89■□□□□ 0.61
LDB1Q86U70 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.89■□□□□ 0.61
LDB1Q86U70 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.89■□□□□ 0.61
LDB1Q86U70 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.89■□□□□ 0.61
LDB1Q86U70 MIR6786-201ENST00000616843 113 ntBASIC18.89■□□□□ 0.61
LDB1Q86U70 AC130371.2-201ENST00000619443 611 ntBASIC18.89■□□□□ 0.61
LDB1Q86U70 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 AL512353.2-201ENST00000448759 1962 ntBASIC18.89■□□□□ 0.61
LDB1Q86U70 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.89■□□□□ 0.61
LDB1Q86U70 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.89■□□□□ 0.61
LDB1Q86U70 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LDB1Q86U70 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB1Q86U70 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
LDB1Q86U70 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LDB1Q86U70 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.88■□□□□ 0.61
LDB1Q86U70 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.88■□□□□ 0.61
LDB1Q86U70 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
LDB1Q86U70 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.88■□□□□ 0.61
LDB1Q86U70 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LDB1Q86U70 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 AL135905.2-201ENST00000584934 1404 ntBASIC18.88■□□□□ 0.61
LDB1Q86U70 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
LDB1Q86U70 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LDB1Q86U70 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
LDB1Q86U70 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.88■□□□□ 0.61
LDB1Q86U70 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LDB1Q86U70 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
LDB1Q86U70 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LDB1Q86U70 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LDB1Q86U70 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.87■□□□□ 0.61
LDB1Q86U70 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
LDB1Q86U70 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.87■□□□□ 0.61
LDB1Q86U70 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.87■□□□□ 0.61
LDB1Q86U70 AC026271.3-201ENST00000571884 352 ntBASIC18.87■□□□□ 0.61
LDB1Q86U70 AC233702.5-201ENST00000584107 538 ntBASIC18.87■□□□□ 0.61
LDB1Q86U70 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB1Q86U70 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.86■□□□□ 0.61
LDB1Q86U70 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
LDB1Q86U70 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LDB1Q86U70 AL031598.1-201ENST00000561511 1773 ntBASIC18.86■□□□□ 0.61
LDB1Q86U70 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.86■□□□□ 0.61
LDB1Q86U70 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.86■□□□□ 0.61
LDB1Q86U70 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LDB1Q86U70 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 FAM207BP-201ENST00000447172 505 ntBASIC18.86■□□□□ 0.61
LDB1Q86U70 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.86■□□□□ 0.61
LDB1Q86U70 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.86■□□□□ 0.61
LDB1Q86U70 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.86■□□□□ 0.61
LDB1Q86U70 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LDB1Q86U70 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.86■□□□□ 0.61
LDB1Q86U70 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.86■□□□□ 0.61
LDB1Q86U70 AL049637.2-201ENST00000641778 930 ntBASIC18.86■□□□□ 0.61
LDB1Q86U70 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
LDB1Q86U70 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
LDB1Q86U70 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms