Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 AC027612.3-201ENST00000413684 1047 ntBASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM88Q6PEY1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEM88Q6PEY1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 AC093525.10-201ENST00000625130 1569 ntBASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 AP006587.3-201ENST00000525742 1516 ntBASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 GNAS-203ENST00000306120 1878 ntBASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM88Q6PEY1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms