Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 AC010947.1-201ENST00000623454 693 ntBASIC19.7■□□□□ 0.74
TRNP1Q6NT89 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 GPAT2P1-201ENST00000444924 1672 ntBASIC19.7■□□□□ 0.74
TRNP1Q6NT89 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.7■□□□□ 0.74
TRNP1Q6NT89 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 CA15P1-201ENST00000481698 905 ntBASIC19.69■□□□□ 0.74
TRNP1Q6NT89 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 RCC2P3-201ENST00000418112 1537 ntBASIC19.69■□□□□ 0.74
TRNP1Q6NT89 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRNP1Q6NT89 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 AL138781.2-201ENST00000617896 1843 ntBASIC19.68■□□□□ 0.74
TRNP1Q6NT89 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 BX088651.1-201ENST00000540551 451 ntBASIC19.68■□□□□ 0.74
TRNP1Q6NT89 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRNP1Q6NT89 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.67■□□□□ 0.74
TRNP1Q6NT89 AL023284.2-201ENST00000405850 579 ntBASIC19.67■□□□□ 0.74
TRNP1Q6NT89 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.67■□□□□ 0.74
TRNP1Q6NT89 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms