Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VARS2Q5ST30 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.05■□□□□ 0.8
VARS2Q5ST30 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.05■□□□□ 0.8
VARS2Q5ST30 AC083849.1-201ENST00000615227 514 ntBASIC20.05■□□□□ 0.8
VARS2Q5ST30 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
VARS2Q5ST30 IER3-202ENST00000376377 1350 ntBASIC20.05■□□□□ 0.8
VARS2Q5ST30 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
VARS2Q5ST30 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARS2Q5ST30 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARS2Q5ST30 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VARS2Q5ST30 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 AC024243.1-201ENST00000609234 778 ntBASIC20.04■□□□□ 0.8
VARS2Q5ST30 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARS2Q5ST30 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VARS2Q5ST30 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.04■□□□□ 0.8
VARS2Q5ST30 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 ZNF444P1-201ENST00000559497 298 ntBASIC20.03■□□□□ 0.8
VARS2Q5ST30 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VARS2Q5ST30 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VARS2Q5ST30 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VARS2Q5ST30 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.02■□□□□ 0.8
VARS2Q5ST30 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARS2Q5ST30 LINC01311-201ENST00000565162 1445 ntBASIC20.02■□□□□ 0.8
VARS2Q5ST30 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.02■□□□□ 0.8
VARS2Q5ST30 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VARS2Q5ST30 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARS2Q5ST30 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARS2Q5ST30 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARS2Q5ST30 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
VARS2Q5ST30 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VARS2Q5ST30 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VARS2Q5ST30 AC026396.1-201ENST00000419388 421 ntBASIC20.02■□□□□ 0.8
VARS2Q5ST30 KRT18P48-201ENST00000434763 852 ntBASIC20.02■□□□□ 0.8
VARS2Q5ST30 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VARS2Q5ST30 VENTXP5-201ENST00000523979 775 ntBASIC20.02■□□□□ 0.8
VARS2Q5ST30 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VARS2Q5ST30 AL136038.3-201ENST00000561909 1096 ntBASIC20.02■□□□□ 0.8
VARS2Q5ST30 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.02■□□□□ 0.8
VARS2Q5ST30 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.02■□□□□ 0.8
VARS2Q5ST30 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VARS2Q5ST30 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARS2Q5ST30 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
VARS2Q5ST30 AC116407.4-201ENST00000623319 1061 ntBASIC20.02■□□□□ 0.8
VARS2Q5ST30 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
VARS2Q5ST30 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.02■□□□□ 0.8
VARS2Q5ST30 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.02■□□□□ 0.8
VARS2Q5ST30 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VARS2Q5ST30 AFG3L1P-217ENST00000557444 2447 ntBASIC20.02■□□□□ 0.79
VARS2Q5ST30 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.02■□□□□ 0.79
VARS2Q5ST30 IRX1P1-201ENST00000438849 1838 ntBASIC20.02■□□□□ 0.79
VARS2Q5ST30 FEM1AP3-201ENST00000403722 1741 ntBASIC20.02■□□□□ 0.79
VARS2Q5ST30 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms