Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.69■□□□□ 0.74
RAB6CQ53S08 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB6CQ53S08 KRT17P2-201ENST00000300992 1314 ntBASIC19.69■□□□□ 0.74
RAB6CQ53S08 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB6CQ53S08 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RAB6CQ53S08 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB6CQ53S08 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB6CQ53S08 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RAB6CQ53S08 AL031598.1-201ENST00000561511 1773 ntBASIC19.68■□□□□ 0.74
RAB6CQ53S08 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.68■□□□□ 0.74
RAB6CQ53S08 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 FITM1-202ENST00000559294 800 ntBASIC19.68■□□□□ 0.74
RAB6CQ53S08 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6CQ53S08 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RAB6CQ53S08 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RAB6CQ53S08 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB6CQ53S08 KRT8P3-201ENST00000519669 1449 ntBASIC19.68■□□□□ 0.74
RAB6CQ53S08 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAB6CQ53S08 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RAB6CQ53S08 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RAB6CQ53S08 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RAB6CQ53S08 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.67■□□□□ 0.74
RAB6CQ53S08 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB6CQ53S08 AP005242.2-201ENST00000580065 1175 ntBASIC19.67■□□□□ 0.74
RAB6CQ53S08 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.67■□□□□ 0.74
RAB6CQ53S08 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RAB6CQ53S08 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB6CQ53S08 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.67■□□□□ 0.74
RAB6CQ53S08 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB6CQ53S08 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6CQ53S08 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.67■□□□□ 0.74
RAB6CQ53S08 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
RAB6CQ53S08 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB6CQ53S08 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAB6CQ53S08 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
RAB6CQ53S08 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.66■□□□□ 0.74
RAB6CQ53S08 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RAB6CQ53S08 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 MIR4674-201ENST00000582457 87 ntBASIC19.66■□□□□ 0.74
RAB6CQ53S08 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 AC083906.6-201ENST00000641366 219 ntBASIC19.66■□□□□ 0.74
RAB6CQ53S08 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RAB6CQ53S08 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
RAB6CQ53S08 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6CQ53S08 MTMR9LP-203ENST00000426597 1545 ntBASIC19.66■□□□□ 0.74
RAB6CQ53S08 AL499627.1-201ENST00000569373 2188 ntBASIC19.66■□□□□ 0.74
RAB6CQ53S08 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.65■□□□□ 0.74
RAB6CQ53S08 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6CQ53S08 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6CQ53S08 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6CQ53S08 AC104581.1-202ENST00000635932 2618 ntBASIC19.65■□□□□ 0.74
RAB6CQ53S08 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB6CQ53S08 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB6CQ53S08 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6CQ53S08 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.65■□□□□ 0.74
RAB6CQ53S08 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB6CQ53S08 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6CQ53S08 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6CQ53S08 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.65■□□□□ 0.74
RAB6CQ53S08 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms