Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-BQ31612 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-BQ31612 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-BQ31612 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-BQ31612 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-BQ31612 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HLA-BQ31612 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-BQ31612 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.36■□□□□ 0.53
HLA-BQ31612 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-BQ31612 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-BQ31612 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-BQ31612 TOB2P1-201ENST00000469761 992 ntBASIC18.36■□□□□ 0.53
HLA-BQ31612 FOSL1P1-201ENST00000511041 816 ntBASIC18.36■□□□□ 0.53
HLA-BQ31612 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-BQ31612 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.36■□□□□ 0.53
HLA-BQ31612 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-BQ31612 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.36■□□□□ 0.53
HLA-BQ31612 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
HLA-BQ31612 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-BQ31612 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-BQ31612 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-BQ31612 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-BQ31612 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-BQ31612 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HLA-BQ31612 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-BQ31612 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HLA-BQ31612 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-BQ31612 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-BQ31612 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 KRT18P23-201ENST00000435622 1283 ntBASIC18.35■□□□□ 0.53
HLA-BQ31612 AC012615.1-201ENST00000565797 1299 ntBASIC18.35■□□□□ 0.53
HLA-BQ31612 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
HLA-BQ31612 AC104692.2-201ENST00000603054 253 ntBASIC18.35■□□□□ 0.53
HLA-BQ31612 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-BQ31612 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.35■□□□□ 0.53
HLA-BQ31612 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-BQ31612 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HLA-BQ31612 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-BQ31612 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-BQ31612 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-BQ31612 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-BQ31612 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-BQ31612 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-BQ31612 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-BQ31612 Z83836.1-201ENST00000624605 1642 ntBASIC18.34■□□□□ 0.53
HLA-BQ31612 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-BQ31612 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-BQ31612 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-BQ31612 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HLA-BQ31612 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-BQ31612 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-BQ31612 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-BQ31612 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
HLA-BQ31612 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.34■□□□□ 0.53
HLA-BQ31612 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-BQ31612 AL160237.2-201ENST00000556165 472 ntBASIC18.34■□□□□ 0.53
HLA-BQ31612 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-BQ31612 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-BQ31612 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-BQ31612 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.34■□□□□ 0.53
HLA-BQ31612 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HLA-BQ31612 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-BQ31612 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HLA-BQ31612 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
HLA-BQ31612 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HLA-BQ31612 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.34■□□□□ 0.53
HLA-BQ31612 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-BQ31612 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-BQ31612 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-BQ31612 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-BQ31612 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
HLA-BQ31612 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
HLA-BQ31612 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
HLA-BQ31612 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-BQ31612 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-BQ31612 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-BQ31612 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.33■□□□□ 0.53
HLA-BQ31612 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
HLA-BQ31612 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-BQ31612 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-BQ31612 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.33■□□□□ 0.53
HLA-BQ31612 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-BQ31612 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HLA-BQ31612 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms