Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.06■□□□□ 0.8
ERCC6LQ2NKX8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 MIR6084-201ENST00000622012 110 ntBASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC6LQ2NKX8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 HTR7P1-202ENST00000624664 4411 ntBASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 AC108860.2-201ENST00000562760 2183 ntBASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 AL139384.1-201ENST00000612143 3047 ntBASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ERCC6LQ2NKX8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 AC116351.2-201ENST00000606540 1585 ntBASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC6LQ2NKX8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms