Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PRAMEP78395 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.09■□□□□ 0.65
PRAMEP78395 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.09■□□□□ 0.65
PRAMEP78395 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.09■□□□□ 0.65
PRAMEP78395 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 PRORSD1P-201ENST00000295112 541 ntBASIC19.09■□□□□ 0.65
PRAMEP78395 AC004980.1-204ENST00000429707 299 ntBASIC19.09■□□□□ 0.65
PRAMEP78395 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.09■□□□□ 0.65
PRAMEP78395 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.09■□□□□ 0.65
PRAMEP78395 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 AC142381.4-202ENST00000563973 229 ntBASIC19.09■□□□□ 0.65
PRAMEP78395 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.09■□□□□ 0.65
PRAMEP78395 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.09■□□□□ 0.65
PRAMEP78395 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.09■□□□□ 0.65
PRAMEP78395 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.09■□□□□ 0.65
PRAMEP78395 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 KRT16P1-201ENST00000399124 1418 ntBASIC19.08■□□□□ 0.65
PRAMEP78395 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PRAMEP78395 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PRAMEP78395 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRAMEP78395 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PRAMEP78395 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
PRAMEP78395 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.08■□□□□ 0.65
PRAMEP78395 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRAMEP78395 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PRAMEP78395 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRAMEP78395 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.08■□□□□ 0.65
PRAMEP78395 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRAMEP78395 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRAMEP78395 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PRAMEP78395 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PRAMEP78395 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEP78395 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.08■□□□□ 0.64
PRAMEP78395 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.08■□□□□ 0.64
PRAMEP78395 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PRAMEP78395 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.08■□□□□ 0.64
PRAMEP78395 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.08■□□□□ 0.64
PRAMEP78395 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.08■□□□□ 0.64
PRAMEP78395 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.08■□□□□ 0.64
PRAMEP78395 AF186192.3-201ENST00000583427 947 ntBASIC19.08■□□□□ 0.64
PRAMEP78395 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEP78395 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEP78395 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEP78395 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PRAMEP78395 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEP78395 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.08■□□□□ 0.64
PRAMEP78395 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.08■□□□□ 0.64
PRAMEP78395 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEP78395 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PRAMEP78395 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PRAMEP78395 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PRAMEP78395 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.07■□□□□ 0.64
PRAMEP78395 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.07■□□□□ 0.64
PRAMEP78395 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.07■□□□□ 0.64
PRAMEP78395 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.07■□□□□ 0.64
PRAMEP78395 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 CR392000.1-201ENST00000624770 1228 ntBASIC19.07■□□□□ 0.64
PRAMEP78395 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PRAMEP78395 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.07■□□□□ 0.64
PRAMEP78395 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEP78395 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEP78395 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms