Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.56■□□□□ 0.24
SEC61A1P61619 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.55■□□□□ 0.24
SEC61A1P61619 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SEC61A1P61619 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.55■□□□□ 0.24
SEC61A1P61619 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.55■□□□□ 0.24
SEC61A1P61619 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.55■□□□□ 0.24
SEC61A1P61619 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SEC61A1P61619 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 NOC2LP2-201ENST00000407594 1944 ntBASIC16.55■□□□□ 0.24
SEC61A1P61619 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.55■□□□□ 0.24
SEC61A1P61619 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.55■□□□□ 0.24
SEC61A1P61619 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SEC61A1P61619 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SEC61A1P61619 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SEC61A1P61619 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.55■□□□□ 0.24
SEC61A1P61619 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.55■□□□□ 0.24
SEC61A1P61619 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.55■□□□□ 0.24
SEC61A1P61619 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.55■□□□□ 0.24
SEC61A1P61619 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.55■□□□□ 0.24
SEC61A1P61619 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.55■□□□□ 0.24
SEC61A1P61619 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.55■□□□□ 0.24
SEC61A1P61619 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.55■□□□□ 0.24
SEC61A1P61619 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SEC61A1P61619 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SEC61A1P61619 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SEC61A1P61619 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61A1P61619 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SEC61A1P61619 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SEC61A1P61619 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.54■□□□□ 0.24
SEC61A1P61619 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.54■□□□□ 0.24
SEC61A1P61619 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SEC61A1P61619 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SEC61A1P61619 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.54■□□□□ 0.24
SEC61A1P61619 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.54■□□□□ 0.24
SEC61A1P61619 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.54■□□□□ 0.24
SEC61A1P61619 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.54■□□□□ 0.24
SEC61A1P61619 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.54■□□□□ 0.24
SEC61A1P61619 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.54■□□□□ 0.24
SEC61A1P61619 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SEC61A1P61619 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SEC61A1P61619 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SEC61A1P61619 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SEC61A1P61619 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61A1P61619 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.53■□□□□ 0.24
SEC61A1P61619 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.53■□□□□ 0.24
SEC61A1P61619 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SEC61A1P61619 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SEC61A1P61619 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SEC61A1P61619 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.53■□□□□ 0.24
SEC61A1P61619 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.53■□□□□ 0.24
SEC61A1P61619 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms