Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.32■□□□□ 0.36
CDC42P60953 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDC42P60953 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDC42P60953 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.32■□□□□ 0.36
CDC42P60953 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42P60953 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42P60953 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.32■□□□□ 0.36
CDC42P60953 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 AL512625.2-201ENST00000417533 625 ntBASIC17.32■□□□□ 0.36
CDC42P60953 AC073210.2-201ENST00000430369 194 ntBASIC17.32■□□□□ 0.36
CDC42P60953 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42P60953 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.32■□□□□ 0.36
CDC42P60953 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.32■□□□□ 0.36
CDC42P60953 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.32■□□□□ 0.36
CDC42P60953 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDC42P60953 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 AL162741.1-201ENST00000565563 1558 ntBASIC17.32■□□□□ 0.36
CDC42P60953 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42P60953 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CDC42P60953 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDC42P60953 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDC42P60953 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.31■□□□□ 0.36
CDC42P60953 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDC42P60953 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDC42P60953 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.31■□□□□ 0.36
CDC42P60953 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.31■□□□□ 0.36
CDC42P60953 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 AC007322.1-201ENST00000426983 750 ntBASIC17.31■□□□□ 0.36
CDC42P60953 YBX1P10-201ENST00000444752 975 ntBASIC17.31■□□□□ 0.36
CDC42P60953 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.31■□□□□ 0.36
CDC42P60953 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.31■□□□□ 0.36
CDC42P60953 AC011767.1-201ENST00000617410 1153 ntBASIC17.31■□□□□ 0.36
CDC42P60953 MIR6821-201ENST00000617625 74 ntBASIC17.31■□□□□ 0.36
CDC42P60953 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.31■□□□□ 0.36
CDC42P60953 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.31■□□□□ 0.36
CDC42P60953 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDC42P60953 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDC42P60953 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDC42P60953 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 AP006587.1-201ENST00000534129 1502 ntBASIC17.31■□□□□ 0.36
CDC42P60953 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.31■□□□□ 0.36
CDC42P60953 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42P60953 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDC42P60953 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.3■□□□□ 0.36
CDC42P60953 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDC42P60953 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDC42P60953 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
CDC42P60953 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDC42P60953 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.3■□□□□ 0.36
CDC42P60953 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.3■□□□□ 0.36
CDC42P60953 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.3■□□□□ 0.36
CDC42P60953 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.3■□□□□ 0.36
CDC42P60953 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.3■□□□□ 0.36
CDC42P60953 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.3■□□□□ 0.36
CDC42P60953 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.3■□□□□ 0.36
CDC42P60953 FZD10-202ENST00000539839 3282 ntBASIC17.3■□□□□ 0.36
CDC42P60953 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.3■□□□□ 0.36
CDC42P60953 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.3■□□□□ 0.36
CDC42P60953 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42P60953 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.3■□□□□ 0.36
CDC42P60953 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDC42P60953 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms