Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TUBB8P6-201ENST00000436895 1288 ntBASIC17.5■□□□□ 0.39
PER3P56645 FAM87A-204ENST00000613235 858 ntBASIC17.5■□□□□ 0.39
PER3P56645 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PER3P56645 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PER3P56645 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PER3P56645 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.5■□□□□ 0.39
PER3P56645 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PER3P56645 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PER3P56645 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PER3P56645 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.5■□□□□ 0.39
PER3P56645 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.5■□□□□ 0.39
PER3P56645 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PER3P56645 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PER3P56645 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PER3P56645 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PER3P56645 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.49■□□□□ 0.39
PER3P56645 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 MESTP1-201ENST00000404287 994 ntBASIC17.49■□□□□ 0.39
PER3P56645 AC117947.1-201ENST00000427448 529 ntBASIC17.49■□□□□ 0.39
PER3P56645 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.49■□□□□ 0.39
PER3P56645 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.49■□□□□ 0.39
PER3P56645 AL512604.3-201ENST00000569583 964 ntBASIC17.49■□□□□ 0.39
PER3P56645 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PER3P56645 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PER3P56645 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.49■□□□□ 0.39
PER3P56645 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.49■□□□□ 0.39
PER3P56645 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PER3P56645 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PER3P56645 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PER3P56645 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
PER3P56645 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PER3P56645 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.48■□□□□ 0.39
PER3P56645 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.48■□□□□ 0.39
PER3P56645 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PER3P56645 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PER3P56645 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PER3P56645 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PER3P56645 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PER3P56645 LTB4R2-202ENST00000528054 3092 ntBASIC17.48■□□□□ 0.39
PER3P56645 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PER3P56645 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.48■□□□□ 0.39
PER3P56645 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PER3P56645 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.48■□□□□ 0.39
PER3P56645 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.48■□□□□ 0.39
PER3P56645 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.48■□□□□ 0.39
PER3P56645 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PER3P56645 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.48■□□□□ 0.39
PER3P56645 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.48■□□□□ 0.39
PER3P56645 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PER3P56645 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.48■□□□□ 0.39
PER3P56645 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
PER3P56645 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PER3P56645 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PER3P56645 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.47■□□□□ 0.39
PER3P56645 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
PER3P56645 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
PER3P56645 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.47■□□□□ 0.39
PER3P56645 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 AC009947.2-201ENST00000444014 672 ntBASIC17.47■□□□□ 0.39
PER3P56645 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.47■□□□□ 0.39
PER3P56645 COX11P1-201ENST00000489116 835 ntBASIC17.47■□□□□ 0.39
PER3P56645 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.47■□□□□ 0.39
PER3P56645 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.47■□□□□ 0.39
PER3P56645 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.47■□□□□ 0.39
PER3P56645 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.47■□□□□ 0.39
PER3P56645 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.47■□□□□ 0.39
PER3P56645 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.47■□□□□ 0.39
PER3P56645 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.47■□□□□ 0.39
PER3P56645 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.47■□□□□ 0.39
PER3P56645 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.47■□□□□ 0.39
PER3P56645 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.47■□□□□ 0.39
PER3P56645 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.47■□□□□ 0.39
PER3P56645 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
PER3P56645 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.47■□□□□ 0.39
PER3P56645 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PER3P56645 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
PER3P56645 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms