Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL390961.4-201ENST00000623958 2535 ntBASIC17.36■□□□□ 0.37
CDH11P55287 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH11P55287 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH11P55287 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDH11P55287 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH11P55287 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH11P55287 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
CDH11P55287 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CDH11P55287 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDH11P55287 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH11P55287 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH11P55287 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH11P55287 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH11P55287 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDH11P55287 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH11P55287 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH11P55287 AC135050.7-201ENST00000624508 2218 ntBASIC17.35■□□□□ 0.37
CDH11P55287 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH11P55287 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH11P55287 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH11P55287 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CDH11P55287 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH11P55287 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CDH11P55287 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH11P55287 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH11P55287 AL596275.1-201ENST00000423464 877 ntBASIC17.34■□□□□ 0.37
CDH11P55287 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH11P55287 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDH11P55287 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH11P55287 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH11P55287 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.34■□□□□ 0.37
CDH11P55287 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH11P55287 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.34■□□□□ 0.37
CDH11P55287 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH11P55287 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.34■□□□□ 0.37
CDH11P55287 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH11P55287 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH11P55287 MTDHP1-201ENST00000605323 784 ntBASIC17.34■□□□□ 0.37
CDH11P55287 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH11P55287 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH11P55287 FP475955.4-201ENST00000623131 1990 ntBASIC17.34■□□□□ 0.37
CDH11P55287 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH11P55287 AL023875.1-201ENST00000640777 796 ntBASIC17.34■□□□□ 0.37
CDH11P55287 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH11P55287 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CDH11P55287 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CDH11P55287 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH11P55287 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH11P55287 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH11P55287 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDH11P55287 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH11P55287 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.33■□□□□ 0.37
CDH11P55287 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH11P55287 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH11P55287 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH11P55287 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CDH11P55287 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH11P55287 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH11P55287 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH11P55287 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH11P55287 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH11P55287 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH11P55287 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH11P55287 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CDH11P55287 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH11P55287 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH11P55287 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CDH11P55287 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH11P55287 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH11P55287 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH11P55287 IRX1P1-201ENST00000438849 1838 ntBASIC17.33■□□□□ 0.36
CDH11P55287 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH11P55287 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH11P55287 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH11P55287 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms