Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
EMP3P54852 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
EMP3P54852 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
EMP3P54852 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 RBM17P1-201ENST00000453646 1190 ntBASIC18.37■□□□□ 0.53
EMP3P54852 Z85996.1-201ENST00000494644 937 ntBASIC18.37■□□□□ 0.53
EMP3P54852 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.37■□□□□ 0.53
EMP3P54852 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.37■□□□□ 0.53
EMP3P54852 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EMP3P54852 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.37■□□□□ 0.53
EMP3P54852 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.37■□□□□ 0.53
EMP3P54852 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.37■□□□□ 0.53
EMP3P54852 AC079598.2-202ENST00000546624 1451 ntBASIC18.37■□□□□ 0.53
EMP3P54852 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 AC093484.2-201ENST00000580996 2166 ntBASIC18.37■□□□□ 0.53
EMP3P54852 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EMP3P54852 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.36■□□□□ 0.53
EMP3P54852 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
EMP3P54852 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
EMP3P54852 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 AC004951.3-201ENST00000418645 1148 ntBASIC18.36■□□□□ 0.53
EMP3P54852 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.36■□□□□ 0.53
EMP3P54852 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.36■□□□□ 0.53
EMP3P54852 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.36■□□□□ 0.53
EMP3P54852 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 RCC2P6-201ENST00000526625 1557 ntBASIC18.36■□□□□ 0.53
EMP3P54852 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.36■□□□□ 0.53
EMP3P54852 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.36■□□□□ 0.53
EMP3P54852 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
EMP3P54852 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
EMP3P54852 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
EMP3P54852 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.36■□□□□ 0.53
EMP3P54852 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EMP3P54852 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
EMP3P54852 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.35■□□□□ 0.53
EMP3P54852 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
EMP3P54852 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
EMP3P54852 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.35■□□□□ 0.53
EMP3P54852 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.35■□□□□ 0.53
EMP3P54852 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.35■□□□□ 0.53
EMP3P54852 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
EMP3P54852 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
EMP3P54852 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.35■□□□□ 0.53
EMP3P54852 AC011506.1-201ENST00000474329 610 ntBASIC18.35■□□□□ 0.53
EMP3P54852 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
EMP3P54852 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.35■□□□□ 0.53
EMP3P54852 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.35■□□□□ 0.53
EMP3P54852 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.35■□□□□ 0.53
EMP3P54852 AP000692.2-201ENST00000608391 879 ntBASIC18.35■□□□□ 0.53
EMP3P54852 AP000240.1-201ENST00000609910 452 ntBASIC18.35■□□□□ 0.53
EMP3P54852 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
EMP3P54852 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.35■□□□□ 0.53
EMP3P54852 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.35■□□□□ 0.53
EMP3P54852 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.35■□□□□ 0.53
EMP3P54852 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
EMP3P54852 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
EMP3P54852 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
EMP3P54852 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EMP3P54852 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.34■□□□□ 0.53
EMP3P54852 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EMP3P54852 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.34■□□□□ 0.53
EMP3P54852 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EMP3P54852 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
EMP3P54852 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms