Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATN1P54259 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATN1P54259 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATN1P54259 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATN1P54259 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.85■□□□□ 0.93
ATN1P54259 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.85■□□□□ 0.93
ATN1P54259 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.85■□□□□ 0.93
ATN1P54259 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.85■□□□□ 0.93
ATN1P54259 AC090616.6-201ENST00000582640 721 ntBASIC20.85■□□□□ 0.93
ATN1P54259 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ATN1P54259 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATN1P54259 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATN1P54259 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.85■□□□□ 0.93
ATN1P54259 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATN1P54259 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ATN1P54259 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ATN1P54259 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATN1P54259 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATN1P54259 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATN1P54259 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.84■□□□□ 0.93
ATN1P54259 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATN1P54259 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATN1P54259 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.84■□□□□ 0.93
ATN1P54259 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATN1P54259 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ATN1P54259 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.84■□□□□ 0.93
ATN1P54259 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.84■□□□□ 0.93
ATN1P54259 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.84■□□□□ 0.93
ATN1P54259 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.84■□□□□ 0.93
ATN1P54259 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ATN1P54259 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATN1P54259 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
ATN1P54259 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATN1P54259 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.84■□□□□ 0.93
ATN1P54259 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATN1P54259 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATN1P54259 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.84■□□□□ 0.93
ATN1P54259 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATN1P54259 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATN1P54259 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATN1P54259 IL9RP2-201ENST00000423948 1312 ntBASIC20.83■□□□□ 0.93
ATN1P54259 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.83■□□□□ 0.93
ATN1P54259 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATN1P54259 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.83■□□□□ 0.93
ATN1P54259 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATN1P54259 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATN1P54259 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ATN1P54259 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATN1P54259 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.83■□□□□ 0.93
ATN1P54259 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.83■□□□□ 0.93
ATN1P54259 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.83■□□□□ 0.93
ATN1P54259 RN7SL275P-201ENST00000582762 335 ntBASIC20.83■□□□□ 0.93
ATN1P54259 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATN1P54259 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.83■□□□□ 0.93
ATN1P54259 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ATN1P54259 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ATN1P54259 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATN1P54259 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATN1P54259 SDHAP1-207ENST00000440850 2000 ntBASIC20.83■□□□□ 0.92
ATN1P54259 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATN1P54259 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ATN1P54259 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.83■□□□□ 0.92
ATN1P54259 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATN1P54259 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATN1P54259 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATN1P54259 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATN1P54259 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATN1P54259 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.82■□□□□ 0.92
ATN1P54259 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ATN1P54259 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATN1P54259 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATN1P54259 ZNF815P-204ENST00000434898 1737 ntBASIC20.82■□□□□ 0.92
ATN1P54259 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATN1P54259 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATN1P54259 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATN1P54259 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATN1P54259 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.82■□□□□ 0.92
ATN1P54259 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ATN1P54259 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.82■□□□□ 0.92
ATN1P54259 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.82■□□□□ 0.92
ATN1P54259 AP003733.1-201ENST00000491725 852 ntBASIC20.82■□□□□ 0.92
ATN1P54259 SLC25A1P1-201ENST00000528351 927 ntBASIC20.82■□□□□ 0.92
ATN1P54259 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.82■□□□□ 0.92
ATN1P54259 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.82■□□□□ 0.92
ATN1P54259 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.82■□□□□ 0.92
ATN1P54259 Z69720.1-201ENST00000601483 472 ntBASIC20.82■□□□□ 0.92
ATN1P54259 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.82■□□□□ 0.92
ATN1P54259 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.82■□□□□ 0.92
ATN1P54259 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATN1P54259 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATN1P54259 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATN1P54259 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.82■□□□□ 0.92
ATN1P54259 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATN1P54259 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.81■□□□□ 0.92
ATN1P54259 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.81■□□□□ 0.92
ATN1P54259 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.81■□□□□ 0.92
ATN1P54259 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms