Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACLYP53396 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACLYP53396 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.86■□□□□ 0.93
ACLYP53396 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACLYP53396 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACLYP53396 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.85■□□□□ 0.93
ACLYP53396 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ACLYP53396 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ACLYP53396 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.85■□□□□ 0.93
ACLYP53396 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.85■□□□□ 0.93
ACLYP53396 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 AC104390.1-201ENST00000555663 520 ntBASIC20.85■□□□□ 0.93
ACLYP53396 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.85■□□□□ 0.93
ACLYP53396 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 AC005332.3-201ENST00000589904 676 ntBASIC20.85■□□□□ 0.93
ACLYP53396 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.85■□□□□ 0.93
ACLYP53396 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.85■□□□□ 0.93
ACLYP53396 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 AL109659.2-201ENST00000606809 1674 ntBASIC20.85■□□□□ 0.93
ACLYP53396 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 KRT8P7-201ENST00000533003 1432 ntBASIC20.85■□□□□ 0.93
ACLYP53396 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACLYP53396 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.84■□□□□ 0.93
ACLYP53396 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
ACLYP53396 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ACLYP53396 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.84■□□□□ 0.93
ACLYP53396 AP003733.1-201ENST00000491725 852 ntBASIC20.84■□□□□ 0.93
ACLYP53396 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.84■□□□□ 0.93
ACLYP53396 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.84■□□□□ 0.93
ACLYP53396 AC074051.2-201ENST00000565115 352 ntBASIC20.84■□□□□ 0.93
ACLYP53396 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.84■□□□□ 0.93
ACLYP53396 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.84■□□□□ 0.93
ACLYP53396 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.84■□□□□ 0.93
ACLYP53396 AC138894.3-201ENST00000603787 634 ntBASIC20.84■□□□□ 0.93
ACLYP53396 AL390719.2-201ENST00000606993 987 ntBASIC20.84■□□□□ 0.93
ACLYP53396 IGHV3-41-201ENST00000613121 348 ntBASIC20.84■□□□□ 0.93
ACLYP53396 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ACLYP53396 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.84■□□□□ 0.93
ACLYP53396 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.84■□□□□ 0.93
ACLYP53396 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ACLYP53396 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACLYP53396 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ACLYP53396 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACLYP53396 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACLYP53396 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
ACLYP53396 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ACLYP53396 AC007375.3-201ENST00000600936 2314 ntBASIC20.83■□□□□ 0.93
ACLYP53396 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACLYP53396 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ACLYP53396 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACLYP53396 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ACLYP53396 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ACLYP53396 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.83■□□□□ 0.93
ACLYP53396 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
ACLYP53396 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.83■□□□□ 0.93
ACLYP53396 AC079776.4-201ENST00000511039 504 ntBASIC20.83■□□□□ 0.93
ACLYP53396 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.83■□□□□ 0.93
ACLYP53396 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.83■□□□□ 0.93
ACLYP53396 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACLYP53396 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACLYP53396 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ACLYP53396 HOXB1-202ENST00000577092 1414 ntBASIC20.83■□□□□ 0.93
ACLYP53396 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
ACLYP53396 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ACLYP53396 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ACLYP53396 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ACLYP53396 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.83■□□□□ 0.92
ACLYP53396 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.83■□□□□ 0.92
ACLYP53396 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms