Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
SMSP52788 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.72■□□□□ 0.43
SMSP52788 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.72■□□□□ 0.43
SMSP52788 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.72■□□□□ 0.43
SMSP52788 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMSP52788 MIR1238-201ENST00000408483 83 ntBASIC17.72■□□□□ 0.43
SMSP52788 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.72■□□□□ 0.43
SMSP52788 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
SMSP52788 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.72■□□□□ 0.43
SMSP52788 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.72■□□□□ 0.43
SMSP52788 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.72■□□□□ 0.43
SMSP52788 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
SMSP52788 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.72■□□□□ 0.43
SMSP52788 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SMSP52788 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SMSP52788 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SMSP52788 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.72■□□□□ 0.43
SMSP52788 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.72■□□□□ 0.43
SMSP52788 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.72■□□□□ 0.43
SMSP52788 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.71■□□□□ 0.43
SMSP52788 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 CROCCP3-202ENST00000420820 1947 ntBASIC17.71■□□□□ 0.43
SMSP52788 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.71■□□□□ 0.43
SMSP52788 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.71■□□□□ 0.43
SMSP52788 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.71■□□□□ 0.43
SMSP52788 AP000525.1-201ENST00000608286 694 ntBASIC17.71■□□□□ 0.43
SMSP52788 REXO1L10P-201ENST00000615707 1290 ntBASIC17.71■□□□□ 0.43
SMSP52788 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
SMSP52788 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.71■□□□□ 0.43
SMSP52788 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.71■□□□□ 0.43
SMSP52788 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMSP52788 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SMSP52788 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SMSP52788 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 AC124283.5-201ENST00000624661 1809 ntBASIC17.7■□□□□ 0.42
SMSP52788 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SMSP52788 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
SMSP52788 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SMSP52788 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.7■□□□□ 0.42
SMSP52788 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.7■□□□□ 0.42
SMSP52788 AC005521.1-201ENST00000393351 872 ntBASIC17.7■□□□□ 0.42
SMSP52788 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.7■□□□□ 0.42
SMSP52788 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.7■□□□□ 0.42
SMSP52788 AL137013.1-201ENST00000432946 1228 ntBASIC17.7■□□□□ 0.42
SMSP52788 KSR1P1-201ENST00000446298 240 ntBASIC17.7■□□□□ 0.42
SMSP52788 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.7■□□□□ 0.42
SMSP52788 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.7■□□□□ 0.42
SMSP52788 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.7■□□□□ 0.42
SMSP52788 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 AL161938.1-201ENST00000569833 2180 ntBASIC17.7■□□□□ 0.42
SMSP52788 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMSP52788 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.7■□□□□ 0.42
SMSP52788 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.69■□□□□ 0.42
SMSP52788 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.69■□□□□ 0.42
SMSP52788 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.69■□□□□ 0.42
SMSP52788 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.69■□□□□ 0.42
SMSP52788 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMSP52788 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMSP52788 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.69■□□□□ 0.42
SMSP52788 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms