Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR1P51861 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDR1P51861 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.69■□□□□ 0.9
CDR1P51861 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.69■□□□□ 0.9
CDR1P51861 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.69■□□□□ 0.9
CDR1P51861 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CDR1P51861 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDR1P51861 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.69■□□□□ 0.9
CDR1P51861 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDR1P51861 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.69■□□□□ 0.9
CDR1P51861 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.69■□□□□ 0.9
CDR1P51861 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CDR1P51861 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 CYP2D8P-201ENST00000433633 1490 ntBASIC20.69■□□□□ 0.9
CDR1P51861 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDR1P51861 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.68■□□□□ 0.9
CDR1P51861 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CDR1P51861 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.68■□□□□ 0.9
CDR1P51861 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDR1P51861 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.68■□□□□ 0.9
CDR1P51861 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.68■□□□□ 0.9
CDR1P51861 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDR1P51861 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 MESTP1-201ENST00000404287 994 ntBASIC20.68■□□□□ 0.9
CDR1P51861 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.68■□□□□ 0.9
CDR1P51861 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.68■□□□□ 0.9
CDR1P51861 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.68■□□□□ 0.9
CDR1P51861 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CDR1P51861 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDR1P51861 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR1P51861 AP001271.2-201ENST00000624018 1556 ntBASIC20.68■□□□□ 0.9
CDR1P51861 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDR1P51861 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.67■□□□□ 0.9
CDR1P51861 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDR1P51861 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
CDR1P51861 AC008040.2-201ENST00000461049 708 ntBASIC20.67■□□□□ 0.9
CDR1P51861 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.67■□□□□ 0.9
CDR1P51861 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.67■□□□□ 0.9
CDR1P51861 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.67■□□□□ 0.9
CDR1P51861 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.67■□□□□ 0.9
CDR1P51861 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CDR1P51861 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR1P51861 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CDR1P51861 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.66■□□□□ 0.9
CDR1P51861 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR1P51861 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.66■□□□□ 0.9
CDR1P51861 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR1P51861 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDR1P51861 MMP23A-201ENST00000234610 1017 ntBASIC20.66■□□□□ 0.9
CDR1P51861 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR1P51861 AC004980.1-204ENST00000429707 299 ntBASIC20.66■□□□□ 0.9
CDR1P51861 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDR1P51861 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.66■□□□□ 0.9
CDR1P51861 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.66■□□□□ 0.9
CDR1P51861 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.66■□□□□ 0.9
CDR1P51861 MIR6786-201ENST00000616843 113 ntBASIC20.66■□□□□ 0.9
CDR1P51861 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDR1P51861 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CDR1P51861 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.66■□□□□ 0.9
CDR1P51861 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDR1P51861 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDR1P51861 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms