Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.68■□□□□ 0.26
CCR9P51686 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.68■□□□□ 0.26
CCR9P51686 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCR9P51686 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCR9P51686 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCR9P51686 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.68■□□□□ 0.26
CCR9P51686 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCR9P51686 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCR9P51686 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCR9P51686 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CCR9P51686 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.67■□□□□ 0.26
CCR9P51686 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.67■□□□□ 0.26
CCR9P51686 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.67■□□□□ 0.26
CCR9P51686 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCR9P51686 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.67■□□□□ 0.26
CCR9P51686 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.67■□□□□ 0.26
CCR9P51686 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.67■□□□□ 0.26
CCR9P51686 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.67■□□□□ 0.26
CCR9P51686 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCR9P51686 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCR9P51686 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.67■□□□□ 0.26
CCR9P51686 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.67■□□□□ 0.26
CCR9P51686 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CCR9P51686 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.66■□□□□ 0.26
CCR9P51686 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCR9P51686 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.66■□□□□ 0.26
CCR9P51686 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.66■□□□□ 0.26
CCR9P51686 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.66■□□□□ 0.26
CCR9P51686 GUSBP6-202ENST00000438529 1198 ntBASIC16.66■□□□□ 0.26
CCR9P51686 TSPY6P-201ENST00000448518 926 ntBASIC16.66■□□□□ 0.26
CCR9P51686 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.66■□□□□ 0.26
CCR9P51686 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.66■□□□□ 0.26
CCR9P51686 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.66■□□□□ 0.26
CCR9P51686 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.66■□□□□ 0.26
CCR9P51686 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.66■□□□□ 0.26
CCR9P51686 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.66■□□□□ 0.26
CCR9P51686 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.66■□□□□ 0.26
CCR9P51686 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.66■□□□□ 0.26
CCR9P51686 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCR9P51686 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCR9P51686 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCR9P51686 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.66■□□□□ 0.26
CCR9P51686 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCR9P51686 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCR9P51686 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.65■□□□□ 0.26
CCR9P51686 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.65■□□□□ 0.26
CCR9P51686 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.65■□□□□ 0.26
CCR9P51686 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.65■□□□□ 0.26
CCR9P51686 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCR9P51686 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.65■□□□□ 0.26
CCR9P51686 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCR9P51686 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCR9P51686 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms