Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.97□□□□□ -0.01
CDC34P49427 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDC34P49427 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC34P49427 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC34P49427 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC34P49427 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC34P49427 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDC34P49427 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDC34P49427 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.96□□□□□ -0.01
CDC34P49427 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC34P49427 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.96□□□□□ -0.01
CDC34P49427 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC34P49427 RARRES2P4-201ENST00000514074 484 ntBASIC14.96□□□□□ -0.01
CDC34P49427 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
CDC34P49427 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDC34P49427 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC34P49427 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.96□□□□□ -0.01
CDC34P49427 AC131212.1-201ENST00000613771 668 ntBASIC14.96□□□□□ -0.01
CDC34P49427 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC34P49427 AC013268.1-206ENST00000638368 961 ntBASIC14.96□□□□□ -0.01
CDC34P49427 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC34P49427 AC112229.1-201ENST00000639295 961 ntBASIC14.96□□□□□ -0.01
CDC34P49427 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
CDC34P49427 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC34P49427 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC34P49427 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC34P49427 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC34P49427 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CDC34P49427 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC34P49427 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC34P49427 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CDC34P49427 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDC34P49427 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC34P49427 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC34P49427 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDC34P49427 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDC34P49427 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDC34P49427 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.95□□□□□ -0.02
CDC34P49427 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC34P49427 AC073592.3-201ENST00000625118 1834 ntBASIC14.95□□□□□ -0.02
CDC34P49427 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC34P49427 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.95□□□□□ -0.02
CDC34P49427 KRT18P14-201ENST00000534205 1250 ntBASIC14.95□□□□□ -0.02
CDC34P49427 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC34P49427 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDC34P49427 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.95□□□□□ -0.02
CDC34P49427 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC34P49427 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC34P49427 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDC34P49427 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDC34P49427 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC34P49427 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC34P49427 FEM1AP3-201ENST00000403722 1741 ntBASIC14.95□□□□□ -0.02
CDC34P49427 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CDC34P49427 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 TFP1-202ENST00000475455 1573 ntBASIC14.94□□□□□ -0.02
CDC34P49427 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDC34P49427 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDC34P49427 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC34P49427 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms