Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
PCP4P48539 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
PCP4P48539 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.1□□□□□ -0.31
PCP4P48539 CICP23-201ENST00000605013 2741 ntBASIC13.1□□□□□ -0.31
PCP4P48539 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
PCP4P48539 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.09□□□□□ -0.31
PCP4P48539 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 AC008764.6-201ENST00000595909 2069 ntBASIC13.09□□□□□ -0.31
PCP4P48539 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.09□□□□□ -0.31
PCP4P48539 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
PCP4P48539 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PCP4P48539 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.09□□□□□ -0.31
PCP4P48539 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC13.09□□□□□ -0.31
PCP4P48539 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
PCP4P48539 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PCP4P48539 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.09□□□□□ -0.31
PCP4P48539 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCP4P48539 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PCP4P48539 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.09□□□□□ -0.31
PCP4P48539 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.09□□□□□ -0.31
PCP4P48539 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
PCP4P48539 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
PCP4P48539 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
PCP4P48539 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PCP4P48539 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PCP4P48539 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
PCP4P48539 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PCP4P48539 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
PCP4P48539 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC13.08□□□□□ -0.32
PCP4P48539 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.08□□□□□ -0.32
PCP4P48539 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PCP4P48539 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.08□□□□□ -0.32
PCP4P48539 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
PCP4P48539 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.08□□□□□ -0.32
PCP4P48539 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.08□□□□□ -0.32
PCP4P48539 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 AC011700.1-201ENST00000610409 2627 ntBASIC13.08□□□□□ -0.32
PCP4P48539 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.08□□□□□ -0.32
PCP4P48539 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
PCP4P48539 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.08□□□□□ -0.32
PCP4P48539 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
PCP4P48539 AP004607.7-201ENST00000527152 1677 ntBASIC13.08□□□□□ -0.32
PCP4P48539 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.08□□□□□ -0.32
PCP4P48539 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PCP4P48539 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCP4P48539 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC13.08□□□□□ -0.32
PCP4P48539 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.08□□□□□ -0.32
PCP4P48539 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
PCP4P48539 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
PCP4P48539 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
PCP4P48539 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
PCP4P48539 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
PCP4P48539 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.07□□□□□ -0.32
PCP4P48539 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.07□□□□□ -0.32
PCP4P48539 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PCP4P48539 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PCP4P48539 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms