Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.61■□□□□ 0.89
USP8P40818 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.61■□□□□ 0.89
USP8P40818 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
USP8P40818 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
USP8P40818 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
USP8P40818 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.6■□□□□ 0.89
USP8P40818 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.6■□□□□ 0.89
USP8P40818 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
USP8P40818 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.6■□□□□ 0.89
USP8P40818 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.6■□□□□ 0.89
USP8P40818 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.6■□□□□ 0.89
USP8P40818 FAM197Y4-202ENST00000622692 608 ntBASIC20.6■□□□□ 0.89
USP8P40818 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
USP8P40818 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
USP8P40818 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP8P40818 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.6■□□□□ 0.89
USP8P40818 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP8P40818 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.59■□□□□ 0.89
USP8P40818 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP8P40818 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP8P40818 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.59■□□□□ 0.89
USP8P40818 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP8P40818 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.59■□□□□ 0.89
USP8P40818 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP8P40818 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
USP8P40818 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.59■□□□□ 0.89
USP8P40818 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP8P40818 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.59■□□□□ 0.89
USP8P40818 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.59■□□□□ 0.89
USP8P40818 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP8P40818 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
USP8P40818 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.59■□□□□ 0.89
USP8P40818 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP8P40818 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.59■□□□□ 0.89
USP8P40818 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
USP8P40818 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP8P40818 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.59■□□□□ 0.89
USP8P40818 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP8P40818 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP8P40818 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.58■□□□□ 0.89
USP8P40818 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP8P40818 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP8P40818 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
USP8P40818 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP8P40818 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP8P40818 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
USP8P40818 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP8P40818 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USP8P40818 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP8P40818 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
USP8P40818 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP8P40818 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP8P40818 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.58■□□□□ 0.89
USP8P40818 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USP8P40818 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.58■□□□□ 0.89
USP8P40818 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.58■□□□□ 0.89
USP8P40818 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.58■□□□□ 0.89
USP8P40818 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.58■□□□□ 0.89
USP8P40818 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.58■□□□□ 0.89
USP8P40818 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP8P40818 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.58■□□□□ 0.89
USP8P40818 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.58■□□□□ 0.89
USP8P40818 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP8P40818 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP8P40818 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP8P40818 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP8P40818 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP8P40818 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP8P40818 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
USP8P40818 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP8P40818 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP8P40818 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
USP8P40818 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP8P40818 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.57■□□□□ 0.88
USP8P40818 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP8P40818 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP8P40818 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.57■□□□□ 0.88
USP8P40818 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
USP8P40818 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP8P40818 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP8P40818 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP8P40818 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms