Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RFC1P35251 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RFC1P35251 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.95■□□□□ 0.78
RFC1P35251 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC1P35251 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.94■□□□□ 0.78
RFC1P35251 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.94■□□□□ 0.78
RFC1P35251 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.94■□□□□ 0.78
RFC1P35251 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC1P35251 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC1P35251 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RFC1P35251 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC1P35251 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.93■□□□□ 0.78
RFC1P35251 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.93■□□□□ 0.78
RFC1P35251 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.93■□□□□ 0.78
RFC1P35251 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.93■□□□□ 0.78
RFC1P35251 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.93■□□□□ 0.78
RFC1P35251 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.93■□□□□ 0.78
RFC1P35251 PRSS44-201ENST00000515154 1146 ntBASIC19.93■□□□□ 0.78
RFC1P35251 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.93■□□□□ 0.78
RFC1P35251 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RFC1P35251 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.93■□□□□ 0.78
RFC1P35251 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RFC1P35251 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC1P35251 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
RFC1P35251 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 FSCN1P1-201ENST00000568912 1481 ntBASIC19.92■□□□□ 0.78
RFC1P35251 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RFC1P35251 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.92■□□□□ 0.78
RFC1P35251 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.92■□□□□ 0.78
RFC1P35251 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RFC1P35251 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RFC1P35251 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RFC1P35251 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.92■□□□□ 0.78
RFC1P35251 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
RFC1P35251 AC008550.1-201ENST00000511500 884 ntBASIC19.92■□□□□ 0.78
RFC1P35251 NUDT16P1-203ENST00000513809 620 ntBASIC19.92■□□□□ 0.78
RFC1P35251 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.92■□□□□ 0.78
RFC1P35251 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.92■□□□□ 0.78
RFC1P35251 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 AP001412.1-201ENST00000608405 714 ntBASIC19.92■□□□□ 0.78
RFC1P35251 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RFC1P35251 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.92■□□□□ 0.78
RFC1P35251 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
RFC1P35251 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.92■□□□□ 0.78
RFC1P35251 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RFC1P35251 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC1P35251 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFC1P35251 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC1P35251 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC1P35251 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC1P35251 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC1P35251 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.91■□□□□ 0.78
RFC1P35251 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms