Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.99■□□□□ 0.15
COL8A2P25067 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.99■□□□□ 0.15
COL8A2P25067 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
COL8A2P25067 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
COL8A2P25067 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
COL8A2P25067 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
COL8A2P25067 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.98■□□□□ 0.15
COL8A2P25067 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.98■□□□□ 0.15
COL8A2P25067 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.98■□□□□ 0.15
COL8A2P25067 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.98■□□□□ 0.15
COL8A2P25067 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
COL8A2P25067 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
COL8A2P25067 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 RNF152P1-201ENST00000397754 604 ntBASIC15.98■□□□□ 0.15
COL8A2P25067 TSPY5P-201ENST00000426936 936 ntBASIC15.98■□□□□ 0.15
COL8A2P25067 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.98■□□□□ 0.15
COL8A2P25067 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.98■□□□□ 0.15
COL8A2P25067 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.98■□□□□ 0.15
COL8A2P25067 AC140113.3-201ENST00000605663 199 ntBASIC15.98■□□□□ 0.15
COL8A2P25067 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
COL8A2P25067 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
COL8A2P25067 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.98■□□□□ 0.15
COL8A2P25067 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
COL8A2P25067 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
COL8A2P25067 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL8A2P25067 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.97■□□□□ 0.15
COL8A2P25067 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
COL8A2P25067 AC098818.2-201ENST00000564925 2320 ntBASIC15.97■□□□□ 0.15
COL8A2P25067 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
COL8A2P25067 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.97■□□□□ 0.15
COL8A2P25067 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.97■□□□□ 0.15
COL8A2P25067 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.97■□□□□ 0.15
COL8A2P25067 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.97■□□□□ 0.15
COL8A2P25067 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.97■□□□□ 0.15
COL8A2P25067 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.97■□□□□ 0.15
COL8A2P25067 AC063952.2-201ENST00000498792 1227 ntBASIC15.97■□□□□ 0.15
COL8A2P25067 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.97■□□□□ 0.15
COL8A2P25067 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.97■□□□□ 0.15
COL8A2P25067 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
COL8A2P25067 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.97■□□□□ 0.15
COL8A2P25067 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
COL8A2P25067 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL8A2P25067 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.96■□□□□ 0.15
COL8A2P25067 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.96■□□□□ 0.15
COL8A2P25067 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.96■□□□□ 0.15
COL8A2P25067 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.96■□□□□ 0.15
COL8A2P25067 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.96■□□□□ 0.15
COL8A2P25067 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.96■□□□□ 0.15
COL8A2P25067 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
COL8A2P25067 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.96■□□□□ 0.15
COL8A2P25067 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.96■□□□□ 0.15
COL8A2P25067 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms