Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CD28P10747 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 PCED1CP-201ENST00000419887 785 ntBASIC14.8□□□□□ -0.04
CD28P10747 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 KRT18P38-201ENST00000449496 1282 ntBASIC14.8□□□□□ -0.04
CD28P10747 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.8□□□□□ -0.04
CD28P10747 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.8□□□□□ -0.04
CD28P10747 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.8□□□□□ -0.04
CD28P10747 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.8□□□□□ -0.04
CD28P10747 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.8□□□□□ -0.04
CD28P10747 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.8□□□□□ -0.04
CD28P10747 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CD28P10747 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.8□□□□□ -0.04
CD28P10747 AL121956.5-201ENST00000625261 221 ntBASIC14.8□□□□□ -0.04
CD28P10747 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.8□□□□□ -0.04
CD28P10747 AP000550.4-202ENST00000639755 178 ntBASIC14.8□□□□□ -0.04
CD28P10747 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CD28P10747 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.8□□□□□ -0.04
CD28P10747 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 SDHAP1-207ENST00000440850 2000 ntBASIC14.8□□□□□ -0.04
CD28P10747 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CD28P10747 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.79□□□□□ -0.04
CD28P10747 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 AP000523.1-201ENST00000398242 1049 ntBASIC14.79□□□□□ -0.04
CD28P10747 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 TSPY23P-201ENST00000440136 739 ntBASIC14.79□□□□□ -0.04
CD28P10747 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 FAM86EP-206ENST00000510506 987 ntBASIC14.79□□□□□ -0.04
CD28P10747 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.79□□□□□ -0.04
CD28P10747 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.79□□□□□ -0.04
CD28P10747 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.79□□□□□ -0.04
CD28P10747 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
CD28P10747 MIR4674-201ENST00000582457 87 ntBASIC14.79□□□□□ -0.04
CD28P10747 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.79□□□□□ -0.04
CD28P10747 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.79□□□□□ -0.04
CD28P10747 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CD28P10747 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.79□□□□□ -0.04
CD28P10747 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD28P10747 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD28P10747 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD28P10747 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CD28P10747 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD28P10747 IER3-202ENST00000376377 1350 ntBASIC14.78□□□□□ -0.04
CD28P10747 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.78□□□□□ -0.04
CD28P10747 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.78□□□□□ -0.04
CD28P10747 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.78□□□□□ -0.04
CD28P10747 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CD28P10747 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.78□□□□□ -0.04
CD28P10747 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.78□□□□□ -0.04
CD28P10747 GCSHP2-201ENST00000560971 527 ntBASIC14.78□□□□□ -0.04
CD28P10747 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.78□□□□□ -0.04
CD28P10747 AC008622.2-201ENST00000617006 1229 ntBASIC14.78□□□□□ -0.04
CD28P10747 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.78□□□□□ -0.04
CD28P10747 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CD28P10747 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.78□□□□□ -0.04
CD28P10747 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.78□□□□□ -0.04
CD28P10747 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.78□□□□□ -0.04
CD28P10747 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD28P10747 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms