Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 AC004980.1-204ENST00000429707 299 ntBASIC19.88■□□□□ 0.77
RARAP10276 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.88■□□□□ 0.77
RARAP10276 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.88■□□□□ 0.77
RARAP10276 AP002982.1-201ENST00000492365 877 ntBASIC19.88■□□□□ 0.77
RARAP10276 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.88■□□□□ 0.77
RARAP10276 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.88■□□□□ 0.77
RARAP10276 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.88■□□□□ 0.77
RARAP10276 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.88■□□□□ 0.77
RARAP10276 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.88■□□□□ 0.77
RARAP10276 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.88■□□□□ 0.77
RARAP10276 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RARAP10276 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.87■□□□□ 0.77
RARAP10276 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.87■□□□□ 0.77
RARAP10276 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.87■□□□□ 0.77
RARAP10276 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RARAP10276 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.87■□□□□ 0.77
RARAP10276 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RARAP10276 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.87■□□□□ 0.77
RARAP10276 FAM197Y4-202ENST00000622692 608 ntBASIC19.87■□□□□ 0.77
RARAP10276 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RARAP10276 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.87■□□□□ 0.77
RARAP10276 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RARAP10276 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.86■□□□□ 0.77
RARAP10276 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 AC135050.7-201ENST00000624508 2218 ntBASIC19.86■□□□□ 0.77
RARAP10276 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.86■□□□□ 0.77
RARAP10276 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RARAP10276 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RARAP10276 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.86■□□□□ 0.77
RARAP10276 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.86■□□□□ 0.77
RARAP10276 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 KSR1P1-201ENST00000446298 240 ntBASIC19.86■□□□□ 0.77
RARAP10276 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.86■□□□□ 0.77
RARAP10276 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.86■□□□□ 0.77
RARAP10276 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.86■□□□□ 0.77
RARAP10276 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.86■□□□□ 0.77
RARAP10276 AC131212.4-201ENST00000623606 975 ntBASIC19.86■□□□□ 0.77
RARAP10276 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.86■□□□□ 0.77
RARAP10276 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARAP10276 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RARAP10276 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RARAP10276 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.85■□□□□ 0.77
RARAP10276 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.85■□□□□ 0.77
RARAP10276 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.85■□□□□ 0.77
RARAP10276 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.85■□□□□ 0.77
RARAP10276 AC098590.1-201ENST00000468126 897 ntBASIC19.85■□□□□ 0.77
RARAP10276 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.85■□□□□ 0.77
RARAP10276 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 RARRES2P10-201ENST00000564312 460 ntBASIC19.85■□□□□ 0.77
RARAP10276 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.85■□□□□ 0.77
RARAP10276 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RARAP10276 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARAP10276 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.84■□□□□ 0.77
RARAP10276 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms