Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CAPN1P07384 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CAPN1P07384 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.63■□□□□ 0.57
CAPN1P07384 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.63■□□□□ 0.57
CAPN1P07384 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.63■□□□□ 0.57
CAPN1P07384 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.63■□□□□ 0.57
CAPN1P07384 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CAPN1P07384 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CAPN1P07384 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CAPN1P07384 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.63■□□□□ 0.57
CAPN1P07384 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.63■□□□□ 0.57
CAPN1P07384 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.63■□□□□ 0.57
CAPN1P07384 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN1P07384 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CAPN1P07384 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.62■□□□□ 0.57
CAPN1P07384 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.62■□□□□ 0.57
CAPN1P07384 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 AL355355.2-201ENST00000442321 338 ntBASIC18.62■□□□□ 0.57
CAPN1P07384 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN1P07384 AC012306.2-201ENST00000609350 630 ntBASIC18.62■□□□□ 0.57
CAPN1P07384 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN1P07384 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN1P07384 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN1P07384 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CAPN1P07384 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.62■□□□□ 0.57
CAPN1P07384 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN1P07384 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN1P07384 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CAPN1P07384 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CAPN1P07384 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.61■□□□□ 0.57
CAPN1P07384 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.61■□□□□ 0.57
CAPN1P07384 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CAPN1P07384 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.61■□□□□ 0.57
CAPN1P07384 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.61■□□□□ 0.57
CAPN1P07384 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.61■□□□□ 0.57
CAPN1P07384 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.61■□□□□ 0.57
CAPN1P07384 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.61■□□□□ 0.57
CAPN1P07384 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN1P07384 IRX1P1-201ENST00000438849 1838 ntBASIC18.6■□□□□ 0.57
CAPN1P07384 AL138781.2-201ENST00000617896 1843 ntBASIC18.6■□□□□ 0.57
CAPN1P07384 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CAPN1P07384 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN1P07384 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN1P07384 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN1P07384 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CAPN1P07384 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CAPN1P07384 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CAPN1P07384 HCG11-201ENST00000411553 5696 ntBASIC18.6■□□□□ 0.57
CAPN1P07384 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.6■□□□□ 0.57
CAPN1P07384 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN1P07384 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN1P07384 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN1P07384 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN1P07384 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms