Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CD74P04233 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CD74P04233 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.91■□□□□ 0.14
CD74P04233 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 MIR935-201ENST00000401179 91 ntBASIC15.91■□□□□ 0.14
CD74P04233 AL390719.1-204ENST00000412397 1219 ntBASIC15.91■□□□□ 0.14
CD74P04233 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.91■□□□□ 0.14
CD74P04233 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.91■□□□□ 0.14
CD74P04233 NTF6G-201ENST00000591094 616 ntBASIC15.91■□□□□ 0.14
CD74P04233 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CD74P04233 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.91■□□□□ 0.14
CD74P04233 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.91■□□□□ 0.14
CD74P04233 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.91■□□□□ 0.14
CD74P04233 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.91■□□□□ 0.14
CD74P04233 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CD74P04233 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD74P04233 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.91■□□□□ 0.14
CD74P04233 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.91■□□□□ 0.14
CD74P04233 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.9■□□□□ 0.14
CD74P04233 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CD74P04233 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 AC012313.1-201ENST00000593393 3059 ntBASIC15.9■□□□□ 0.14
CD74P04233 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CD74P04233 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CD74P04233 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 AL512625.2-201ENST00000417533 625 ntBASIC15.9■□□□□ 0.14
CD74P04233 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.9■□□□□ 0.14
CD74P04233 TSPY21P-201ENST00000433481 731 ntBASIC15.9■□□□□ 0.14
CD74P04233 AC005829.2-201ENST00000571422 1056 ntBASIC15.9■□□□□ 0.14
CD74P04233 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.9■□□□□ 0.14
CD74P04233 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CD74P04233 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.9■□□□□ 0.14
CD74P04233 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.9■□□□□ 0.14
CD74P04233 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
CD74P04233 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.9■□□□□ 0.14
CD74P04233 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CD74P04233 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.9■□□□□ 0.14
CD74P04233 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD74P04233 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CD74P04233 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CD74P04233 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CD74P04233 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD74P04233 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.89■□□□□ 0.13
CD74P04233 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CD74P04233 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 AC135776.1-201ENST00000319817 2481 ntBASIC15.89■□□□□ 0.13
CD74P04233 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 AIRN-201ENST00000601203 4374 ntBASIC15.89■□□□□ 0.13
CD74P04233 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CD74P04233 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CD74P04233 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.89■□□□□ 0.13
CD74P04233 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CD74P04233 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CD74P04233 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.89■□□□□ 0.13
CD74P04233 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CD74P04233 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CD74P04233 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD74P04233 HEIH-201ENST00000623091 1652 ntBASIC15.89■□□□□ 0.13
CD74P04233 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms