Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.87■□□□□ 0.45
MT-ND1P03886 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-ND1P03886 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-ND1P03886 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-ND1P03886 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND1P03886 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND1P03886 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-ND1P03886 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND1P03886 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-ND1P03886 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND1P03886 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND1P03886 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
MT-ND1P03886 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND1P03886 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MT-ND1P03886 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MT-ND1P03886 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-ND1P03886 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-ND1P03886 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-ND1P03886 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-ND1P03886 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-ND1P03886 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.86■□□□□ 0.45
MT-ND1P03886 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MT-ND1P03886 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MT-ND1P03886 MIR935-201ENST00000401179 91 ntBASIC17.86■□□□□ 0.45
MT-ND1P03886 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MT-ND1P03886 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-ND1P03886 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
MT-ND1P03886 AC124283.5-201ENST00000624661 1809 ntBASIC17.86■□□□□ 0.45
MT-ND1P03886 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.86■□□□□ 0.45
MT-ND1P03886 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.86■□□□□ 0.45
MT-ND1P03886 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.86■□□□□ 0.45
MT-ND1P03886 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
MT-ND1P03886 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-ND1P03886 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
MT-ND1P03886 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.86■□□□□ 0.45
MT-ND1P03886 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
MT-ND1P03886 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-ND1P03886 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MT-ND1P03886 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
MT-ND1P03886 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.85■□□□□ 0.45
MT-ND1P03886 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
MT-ND1P03886 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 MIPEPP3-201ENST00000412105 444 ntBASIC17.85■□□□□ 0.45
MT-ND1P03886 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MT-ND1P03886 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
MT-ND1P03886 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-ND1P03886 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-ND1P03886 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
MT-ND1P03886 AL121832.2-201ENST00000610979 668 ntBASIC17.85■□□□□ 0.45
MT-ND1P03886 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
MT-ND1P03886 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
MT-ND1P03886 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MT-ND1P03886 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
MT-ND1P03886 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.84■□□□□ 0.45
MT-ND1P03886 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.84■□□□□ 0.45
MT-ND1P03886 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
MT-ND1P03886 AC126763.1-201ENST00000552015 2118 ntBASIC17.84■□□□□ 0.45
MT-ND1P03886 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 ABALON-201ENST00000629058 1903 ntBASIC17.84■□□□□ 0.45
MT-ND1P03886 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MT-ND1P03886 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
MT-ND1P03886 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
MT-ND1P03886 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.84■□□□□ 0.45
MT-ND1P03886 AL390719.1-204ENST00000412397 1219 ntBASIC17.84■□□□□ 0.45
MT-ND1P03886 AC073210.2-201ENST00000430369 194 ntBASIC17.84■□□□□ 0.45
MT-ND1P03886 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.84■□□□□ 0.45
MT-ND1P03886 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.84■□□□□ 0.45
MT-ND1P03886 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.84■□□□□ 0.45
MT-ND1P03886 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.84■□□□□ 0.45
MT-ND1P03886 AC083906.2-201ENST00000511578 360 ntBASIC17.84■□□□□ 0.45
MT-ND1P03886 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.84■□□□□ 0.45
MT-ND1P03886 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
MT-ND1P03886 AC106820.2-201ENST00000563775 3264 ntBASIC17.84■□□□□ 0.45
MT-ND1P03886 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.84■□□□□ 0.45
MT-ND1P03886 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND1P03886 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.84■□□□□ 0.45
MT-ND1P03886 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MT-ND1P03886 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MT-ND1P03886 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms