Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ALDH1A1P00352 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.59■■□□□ 1.05
ALDH1A1P00352 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.59■■□□□ 1.05
ALDH1A1P00352 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.59■■□□□ 1.05
ALDH1A1P00352 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.59■■□□□ 1.05
ALDH1A1P00352 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ALDH1A1P00352 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.59■■□□□ 1.05
ALDH1A1P00352 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.59■■□□□ 1.05
ALDH1A1P00352 AC009065.1-201ENST00000564055 1225 ntBASIC21.59■■□□□ 1.05
ALDH1A1P00352 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.59■■□□□ 1.05
ALDH1A1P00352 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.59■■□□□ 1.05
ALDH1A1P00352 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALDH1A1P00352 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ALDH1A1P00352 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.58■■□□□ 1.05
ALDH1A1P00352 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ALDH1A1P00352 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ALDH1A1P00352 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ALDH1A1P00352 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ALDH1A1P00352 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
ALDH1A1P00352 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ALDH1A1P00352 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ALDH1A1P00352 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.58■■□□□ 1.05
ALDH1A1P00352 RPL13AP23-201ENST00000480739 586 ntBASIC21.58■■□□□ 1.05
ALDH1A1P00352 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.58■■□□□ 1.05
ALDH1A1P00352 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.58■■□□□ 1.05
ALDH1A1P00352 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.58■■□□□ 1.05
ALDH1A1P00352 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.58■■□□□ 1.05
ALDH1A1P00352 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.58■■□□□ 1.05
ALDH1A1P00352 AL109659.2-201ENST00000606809 1674 ntBASIC21.58■■□□□ 1.05
ALDH1A1P00352 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
ALDH1A1P00352 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ALDH1A1P00352 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
ALDH1A1P00352 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.57■■□□□ 1.04
ALDH1A1P00352 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ALDH1A1P00352 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ALDH1A1P00352 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 MIR3180-4-201ENST00000582223 153 ntBASIC21.57■■□□□ 1.04
ALDH1A1P00352 AL591684.3-201ENST00000605187 298 ntBASIC21.57■■□□□ 1.04
ALDH1A1P00352 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
ALDH1A1P00352 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.57■■□□□ 1.04
ALDH1A1P00352 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ALDH1A1P00352 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALDH1A1P00352 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALDH1A1P00352 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALDH1A1P00352 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ALDH1A1P00352 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.56■■□□□ 1.04
ALDH1A1P00352 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.56■■□□□ 1.04
ALDH1A1P00352 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.56■■□□□ 1.04
ALDH1A1P00352 AC139887.3-201ENST00000568585 713 ntBASIC21.56■■□□□ 1.04
ALDH1A1P00352 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.56■■□□□ 1.04
ALDH1A1P00352 AC011840.4-201ENST00000578471 627 ntBASIC21.56■■□□□ 1.04
ALDH1A1P00352 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ALDH1A1P00352 AC243591.1-201ENST00000452967 1364 ntBASIC21.56■■□□□ 1.04
ALDH1A1P00352 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.56■■□□□ 1.04
ALDH1A1P00352 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.56■■□□□ 1.04
ALDH1A1P00352 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALDH1A1P00352 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALDH1A1P00352 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALDH1A1P00352 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALDH1A1P00352 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.55■■□□□ 1.04
ALDH1A1P00352 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALDH1A1P00352 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALDH1A1P00352 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALDH1A1P00352 MIR940-201ENST00000401276 94 ntBASIC21.55■■□□□ 1.04
ALDH1A1P00352 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms