Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE6O95741 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE6O95741 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE6O95741 LINC01465-201ENST00000408887 1940 ntBASIC18.58■□□□□ 0.56
CPNE6O95741 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.58■□□□□ 0.56
CPNE6O95741 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE6O95741 AC093484.2-201ENST00000580996 2166 ntBASIC18.58■□□□□ 0.56
CPNE6O95741 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.58■□□□□ 0.56
CPNE6O95741 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CPNE6O95741 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.58■□□□□ 0.56
CPNE6O95741 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPNE6O95741 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CPNE6O95741 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPNE6O95741 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE6O95741 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.57■□□□□ 0.56
CPNE6O95741 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE6O95741 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE6O95741 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CPNE6O95741 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.57■□□□□ 0.56
CPNE6O95741 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.57■□□□□ 0.56
CPNE6O95741 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE6O95741 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE6O95741 AL138966.2-201ENST00000621997 464 ntBASIC18.57■□□□□ 0.56
CPNE6O95741 AIRN-201ENST00000601203 4374 ntBASIC18.57■□□□□ 0.56
CPNE6O95741 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CPNE6O95741 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPNE6O95741 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CPNE6O95741 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE6O95741 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CPNE6O95741 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CPNE6O95741 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.56■□□□□ 0.56
CPNE6O95741 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE6O95741 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
CPNE6O95741 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE6O95741 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.56■□□□□ 0.56
CPNE6O95741 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.56■□□□□ 0.56
CPNE6O95741 AC022616.7-201ENST00000525383 220 ntBASIC18.56■□□□□ 0.56
CPNE6O95741 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
CPNE6O95741 AL353719.1-201ENST00000566847 864 ntBASIC18.56■□□□□ 0.56
CPNE6O95741 AL512604.3-201ENST00000569583 964 ntBASIC18.56■□□□□ 0.56
CPNE6O95741 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE6O95741 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CPNE6O95741 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE6O95741 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE6O95741 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE6O95741 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE6O95741 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CPNE6O95741 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE6O95741 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE6O95741 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE6O95741 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.55■□□□□ 0.56
CPNE6O95741 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE6O95741 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE6O95741 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CPNE6O95741 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE6O95741 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE6O95741 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CPNE6O95741 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE6O95741 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE6O95741 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE6O95741 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE6O95741 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CPNE6O95741 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.55■□□□□ 0.56
CPNE6O95741 AC117947.1-201ENST00000427448 529 ntBASIC18.55■□□□□ 0.56
CPNE6O95741 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CPNE6O95741 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms