Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP1R3DO95685 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP1R3DO95685 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP1R3DO95685 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP1R3DO95685 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP1R3DO95685 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 TSPY23P-201ENST00000440136 739 ntBASIC17.12■□□□□ 0.33
PPP1R3DO95685 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 AC004264.1-201ENST00000608354 794 ntBASIC17.12■□□□□ 0.33
PPP1R3DO95685 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP1R3DO95685 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPP1R3DO95685 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP1R3DO95685 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP1R3DO95685 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.12■□□□□ 0.33
PPP1R3DO95685 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.11■□□□□ 0.33
PPP1R3DO95685 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PPP1R3DO95685 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.11■□□□□ 0.33
PPP1R3DO95685 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 HLA-L-209ENST00000420110 1011 ntBASIC17.11■□□□□ 0.33
PPP1R3DO95685 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.11■□□□□ 0.33
PPP1R3DO95685 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.11■□□□□ 0.33
PPP1R3DO95685 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.11■□□□□ 0.33
PPP1R3DO95685 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.11■□□□□ 0.33
PPP1R3DO95685 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PPP1R3DO95685 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP1R3DO95685 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPP1R3DO95685 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PPP1R3DO95685 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP1R3DO95685 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.09■□□□□ 0.33
PPP1R3DO95685 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP1R3DO95685 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.09■□□□□ 0.33
PPP1R3DO95685 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP1R3DO95685 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPP1R3DO95685 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms