Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.94■□□□□ 0.78
RTN3O95197 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.94■□□□□ 0.78
RTN3O95197 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.94■□□□□ 0.78
RTN3O95197 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
RTN3O95197 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.94■□□□□ 0.78
RTN3O95197 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 AL138966.2-201ENST00000621997 464 ntBASIC19.94■□□□□ 0.78
RTN3O95197 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RTN3O95197 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.94■□□□□ 0.78
RTN3O95197 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.94■□□□□ 0.78
RTN3O95197 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
RTN3O95197 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.94■□□□□ 0.78
RTN3O95197 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RTN3O95197 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
RTN3O95197 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.93■□□□□ 0.78
RTN3O95197 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RTN3O95197 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 AL049597.2-201ENST00000565575 961 ntBASIC19.93■□□□□ 0.78
RTN3O95197 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.93■□□□□ 0.78
RTN3O95197 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.93■□□□□ 0.78
RTN3O95197 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTN3O95197 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.93■□□□□ 0.78
RTN3O95197 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RTN3O95197 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.93■□□□□ 0.78
RTN3O95197 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RTN3O95197 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.92■□□□□ 0.78
RTN3O95197 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.92■□□□□ 0.78
RTN3O95197 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN3O95197 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN3O95197 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTN3O95197 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.92■□□□□ 0.78
RTN3O95197 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.92■□□□□ 0.78
RTN3O95197 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RTN3O95197 TEX21P-204ENST00000641479 1693 ntBASIC19.92■□□□□ 0.78
RTN3O95197 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.92■□□□□ 0.78
RTN3O95197 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.92■□□□□ 0.78
RTN3O95197 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.92■□□□□ 0.78
RTN3O95197 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.92■□□□□ 0.78
RTN3O95197 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
RTN3O95197 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.92■□□□□ 0.78
RTN3O95197 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN3O95197 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RTN3O95197 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTN3O95197 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RTN3O95197 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN3O95197 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.92■□□□□ 0.78
RTN3O95197 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RTN3O95197 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RTN3O95197 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RTN3O95197 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RTN3O95197 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN3O95197 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN3O95197 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RTN3O95197 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
RTN3O95197 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.91■□□□□ 0.78
RTN3O95197 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.91■□□□□ 0.78
RTN3O95197 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
RTN3O95197 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.91■□□□□ 0.78
RTN3O95197 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RTN3O95197 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RTN3O95197 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN3O95197 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN3O95197 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RTN3O95197 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN3O95197 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.91■□□□□ 0.78
RTN3O95197 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN3O95197 AC018445.3-201ENST00000624177 1945 ntBASIC19.9■□□□□ 0.78
RTN3O95197 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
RTN3O95197 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN3O95197 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
RTN3O95197 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
RTN3O95197 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms