Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.18■□□□□ 0.34
CLPXO76031 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CLPXO76031 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPXO76031 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPXO76031 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPXO76031 AC080080.1-201ENST00000625121 2420 ntBASIC17.17■□□□□ 0.34
CLPXO76031 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPXO76031 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.17■□□□□ 0.34
CLPXO76031 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPXO76031 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.17■□□□□ 0.34
CLPXO76031 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLPXO76031 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLPXO76031 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.16■□□□□ 0.34
CLPXO76031 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.16■□□□□ 0.34
CLPXO76031 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLPXO76031 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 AC026185.1-201ENST00000445748 174 ntBASIC17.16■□□□□ 0.34
CLPXO76031 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.16■□□□□ 0.34
CLPXO76031 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.16■□□□□ 0.34
CLPXO76031 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 BID-214ENST00000617586 542 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.16■□□□□ 0.34
CLPXO76031 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLPXO76031 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLPXO76031 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPXO76031 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.15■□□□□ 0.34
CLPXO76031 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLPXO76031 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.15■□□□□ 0.34
CLPXO76031 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLPXO76031 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.15■□□□□ 0.34
CLPXO76031 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.15■□□□□ 0.34
CLPXO76031 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.15■□□□□ 0.34
CLPXO76031 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CLPXO76031 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.15■□□□□ 0.34
CLPXO76031 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.15■□□□□ 0.34
CLPXO76031 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms