Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.04■□□□□ 0.64
FOXD2O60548 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXD2O60548 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.04■□□□□ 0.64
FOXD2O60548 AC092119.3-201ENST00000612618 583 ntBASIC19.04■□□□□ 0.64
FOXD2O60548 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.04■□□□□ 0.64
FOXD2O60548 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXD2O60548 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
FOXD2O60548 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXD2O60548 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXD2O60548 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXD2O60548 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXD2O60548 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
FOXD2O60548 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
FOXD2O60548 NUS1P1-201ENST00000446295 882 ntBASIC19.03■□□□□ 0.64
FOXD2O60548 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXD2O60548 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
FOXD2O60548 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXD2O60548 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXD2O60548 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
FOXD2O60548 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
FOXD2O60548 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
FOXD2O60548 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
FOXD2O60548 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
FOXD2O60548 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXD2O60548 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXD2O60548 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXD2O60548 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXD2O60548 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXD2O60548 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXD2O60548 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXD2O60548 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXD2O60548 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.02■□□□□ 0.63
FOXD2O60548 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
FOXD2O60548 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXD2O60548 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
FOXD2O60548 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
FOXD2O60548 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.01■□□□□ 0.63
FOXD2O60548 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXD2O60548 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXD2O60548 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXD2O60548 LINC01711-201ENST00000598340 967 ntBASIC19.01■□□□□ 0.63
FOXD2O60548 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
FOXD2O60548 AL121672.3-201ENST00000608644 468 ntBASIC19.01■□□□□ 0.63
FOXD2O60548 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXD2O60548 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
FOXD2O60548 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
FOXD2O60548 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXD2O60548 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
FOXD2O60548 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXD2O60548 AC116562.4-201ENST00000641316 2276 ntBASIC19■□□□□ 0.63
FOXD2O60548 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
FOXD2O60548 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
FOXD2O60548 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXD2O60548 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
FOXD2O60548 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXD2O60548 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19■□□□□ 0.63
FOXD2O60548 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXD2O60548 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms