Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZIC3O60481 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.04■□□□□ 0.32
ZIC3O60481 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.04■□□□□ 0.32
ZIC3O60481 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
ZIC3O60481 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.04■□□□□ 0.32
ZIC3O60481 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
ZIC3O60481 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ZIC3O60481 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ZIC3O60481 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 AC104076.2-201ENST00000448912 469 ntBASIC17.03■□□□□ 0.32
ZIC3O60481 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.03■□□□□ 0.32
ZIC3O60481 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.03■□□□□ 0.32
ZIC3O60481 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.03■□□□□ 0.32
ZIC3O60481 CR769767.2-201ENST00000622735 460 ntBASIC17.03■□□□□ 0.32
ZIC3O60481 AC141257.4-201ENST00000634557 245 ntBASIC17.03■□□□□ 0.32
ZIC3O60481 AC136944.6-201ENST00000634818 245 ntBASIC17.03■□□□□ 0.32
ZIC3O60481 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC3O60481 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZIC3O60481 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
ZIC3O60481 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZIC3O60481 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZIC3O60481 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.02■□□□□ 0.32
ZIC3O60481 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZIC3O60481 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZIC3O60481 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZIC3O60481 BX664615.1-201ENST00000443558 458 ntBASIC17.02■□□□□ 0.32
ZIC3O60481 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.02■□□□□ 0.32
ZIC3O60481 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.02■□□□□ 0.32
ZIC3O60481 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZIC3O60481 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.02■□□□□ 0.32
ZIC3O60481 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.02■□□□□ 0.32
ZIC3O60481 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZIC3O60481 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZIC3O60481 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZIC3O60481 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
ZIC3O60481 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZIC3O60481 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZIC3O60481 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ZIC3O60481 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.02■□□□□ 0.31
ZIC3O60481 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZIC3O60481 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.02■□□□□ 0.31
ZIC3O60481 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.02■□□□□ 0.31
ZIC3O60481 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ZIC3O60481 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.02■□□□□ 0.31
ZIC3O60481 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.01■□□□□ 0.31
ZIC3O60481 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 RCC2P3-201ENST00000418112 1537 ntBASIC17.01■□□□□ 0.31
ZIC3O60481 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.01■□□□□ 0.31
ZIC3O60481 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.01■□□□□ 0.31
ZIC3O60481 AL109659.2-201ENST00000606809 1674 ntBASIC17.01■□□□□ 0.31
ZIC3O60481 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
ZIC3O60481 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
ZIC3O60481 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
ZIC3O60481 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.01■□□□□ 0.31
ZIC3O60481 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.01■□□□□ 0.31
ZIC3O60481 MCCD1P1-208ENST00000445732 328 ntBASIC17.01■□□□□ 0.31
ZIC3O60481 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ZIC3O60481 WWOX-216ENST00000569818 525 ntBASIC17.01■□□□□ 0.31
ZIC3O60481 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.01■□□□□ 0.31
ZIC3O60481 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZIC3O60481 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms