Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 DUX4L8-201ENST00000629013 1275 ntBASIC16.42■□□□□ 0.22
HMX3A6NHT5 DUX4L3-201ENST00000630187 1275 ntBASIC16.42■□□□□ 0.22
HMX3A6NHT5 DUX4L7-201ENST00000630678 1275 ntBASIC16.42■□□□□ 0.22
HMX3A6NHT5 DUX4L5-201ENST00000630834 1275 ntBASIC16.42■□□□□ 0.22
HMX3A6NHT5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 AC004854.2-201ENST00000608450 1441 ntBASIC16.42■□□□□ 0.22
HMX3A6NHT5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMX3A6NHT5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.42■□□□□ 0.22
HMX3A6NHT5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMX3A6NHT5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMX3A6NHT5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.41■□□□□ 0.22
HMX3A6NHT5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMX3A6NHT5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.4■□□□□ 0.22
HMX3A6NHT5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.4■□□□□ 0.22
HMX3A6NHT5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.4■□□□□ 0.22
HMX3A6NHT5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.4■□□□□ 0.22
HMX3A6NHT5 RARRES2P11-201ENST00000635158 484 ntBASIC16.4■□□□□ 0.22
HMX3A6NHT5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.4■□□□□ 0.22
HMX3A6NHT5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.4■□□□□ 0.22
HMX3A6NHT5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 AC135776.1-201ENST00000319817 2481 ntBASIC16.4■□□□□ 0.22
HMX3A6NHT5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.4■□□□□ 0.22
HMX3A6NHT5 AL118508.1-201ENST00000613502 2345 ntBASIC16.4■□□□□ 0.22
HMX3A6NHT5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMX3A6NHT5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.4■□□□□ 0.22
HMX3A6NHT5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.4■□□□□ 0.22
HMX3A6NHT5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HMX3A6NHT5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 AC116050.2-201ENST00000612102 1779 ntBASIC16.39■□□□□ 0.21
HMX3A6NHT5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 KRT16P2-201ENST00000414673 1423 ntBASIC16.39■□□□□ 0.21
HMX3A6NHT5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMX3A6NHT5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.39■□□□□ 0.21
HMX3A6NHT5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms