Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRDV1A0A1B0GX56 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 KRT17P1-201ENST00000399211 1546 ntBASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 YBX1P10-201ENST00000444752 975 ntBASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 AC005837.3-201ENST00000612163 286 ntBASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 BID-214ENST00000617586 542 ntTSL 5 BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRDV1A0A1B0GX56 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 AC073210.2-201ENST00000430369 194 ntBASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 CYP2T1P-201ENST00000432607 1285 ntBASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRDV1A0A1B0GX56 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRDV1A0A1B0GX56 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 DUX4L16-201ENST00000555130 1264 ntBASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRDV1A0A1B0GX56 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms