Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 MTMR9LP-203ENST00000426597 1545 ntBASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 RCC2P6-201ENST00000526625 1557 ntBASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-1A0A0K0K1D8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
TRBV6-1A0A0K0K1D8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRBV6-1A0A0K0K1D8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ZNRF2P3-201ENST00000424200 374 ntBASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRBV6-1A0A0K0K1D8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 AC138028.4-201ENST00000564984 1845 ntBASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV6-1A0A0K0K1D8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms