Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 OR6D1P-203ENST00000641209 4860 ntBASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-6A0A0B4J262 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 GPX1P1-201ENST00000388829 606 ntBASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 CROCCP5-201ENST00000436658 830 ntBASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 AC083906.2-201ENST00000511578 360 ntBASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 AC105020.6-201ENST00000621523 1217 ntBASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-6A0A0B4J262 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 AC067852.2-201ENST00000590513 2313 ntBASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 PCDHA12-202ENST00000613593 2588 ntBASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 AL513477.1-201ENST00000602865 2407 ntBASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV8-6A0A0B4J262 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms