Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 AL050303.2-201ENST00000619798 666 ntBASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 AC083906.6-201ENST00000641366 219 ntBASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV5A0A0B4J249 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 AC126763.1-201ENST00000552015 2118 ntBASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 AC026271.2-201ENST00000428091 497 ntBASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 AC067852.2-201ENST00000590513 2313 ntBASIC14.71□□□□□ -0.05
TRAV5A0A0B4J249 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV5A0A0B4J249 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV5A0A0B4J249 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV5A0A0B4J249 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.71□□□□□ -0.06
TRAV5A0A0B4J249 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV5A0A0B4J249 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 DUSP5P2-201ENST00000426873 1033 ntBASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV5A0A0B4J249 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms