Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 HLA-B-256ENST00000639848 1089 ntBASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 OR6D1P-203ENST00000641209 4860 ntBASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 AC125437.2-201ENST00000625180 2167 ntBASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRAV8-4A0A0B4J246 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV8-4A0A0B4J246 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV8-4A0A0B4J246 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV8-4A0A0B4J246 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAV8-4A0A0B4J246 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV8-4A0A0B4J246 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV8-4A0A0B4J246 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV8-4A0A0B4J246 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 AL138781.1-201ENST00000566567 1274 ntBASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 AC133041.1-202ENST00000642053 222 ntBASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 AC018553.1-201ENST00000616682 1458 ntBASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-4A0A0B4J246 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 AC092666.2-201ENST00000613287 246 ntBASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms