Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 SDHAP1-207ENST00000440850 2000 ntBASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 IRS3P-201ENST00000223076 1006 ntBASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 AC023632.3-201ENST00000521633 145 ntBASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 PCDHA12-202ENST00000613593 2588 ntBASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV12-1A0A0B4J245 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 AC116351.2-201ENST00000606540 1585 ntBASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 AC104187.1-201ENST00000607510 612 ntBASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
TRAV12-1A0A0B4J245 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms