Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 AL023973.1-201ENST00000624619 620 ntBASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV10A0A0B4J240 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 AC009947.2-201ENST00000444014 672 ntBASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV10A0A0B4J240 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 AL157384.1-201ENST00000445995 2473 ntBASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 SDHAP1-207ENST00000440850 2000 ntBASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV10A0A0B4J240 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 AL359075.1-203ENST00000462729 1002 ntBASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms