Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 CROCCP3-202ENST00000420820 1947 ntBASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
AP4E1Q9UPM8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 SNORA78-201ENST00000459373 127 ntBASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 AP003071.4-201ENST00000562276 1284 ntBASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4E1Q9UPM8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 SLC25A1P4-201ENST00000567977 778 ntBASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 MIR4785-201ENST00000585005 73 ntBASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 AC096733.2-201ENST00000609937 1394 ntBASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.66■□□□□ 0.74
AP4E1Q9UPM8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP4E1Q9UPM8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms