Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.9■□□□□ 0.3
COPS3Q9UNS2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
COPS3Q9UNS2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
COPS3Q9UNS2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
COPS3Q9UNS2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.89■□□□□ 0.3
COPS3Q9UNS2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 AC106820.2-201ENST00000563775 3264 ntBASIC16.89■□□□□ 0.29
COPS3Q9UNS2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 AL138781.1-201ENST00000566567 1274 ntBASIC16.89■□□□□ 0.29
COPS3Q9UNS2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 AC008687.6-201ENST00000596318 630 ntBASIC16.89■□□□□ 0.29
COPS3Q9UNS2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 BICD1-207ENST00000551848 1962 ntBASIC16.89■□□□□ 0.29
COPS3Q9UNS2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 HCG11-201ENST00000411553 5696 ntBASIC16.89■□□□□ 0.29
COPS3Q9UNS2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS3Q9UNS2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 AC083906.6-201ENST00000641366 219 ntBASIC16.88■□□□□ 0.29
COPS3Q9UNS2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COPS3Q9UNS2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS3Q9UNS2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS3Q9UNS2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
COPS3Q9UNS2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS3Q9UNS2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms