Protein–RNA interactions for Protein: Q9UBE0

SAE1, SUMO-activating enzyme subunit 1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAE1Q9UBE0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 AC093525.10-201ENST00000625130 1569 ntBASIC19.62■□□□□ 0.73
SAE1Q9UBE0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 AC004980.1-204ENST00000429707 299 ntBASIC19.62■□□□□ 0.73
SAE1Q9UBE0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 Z98044.1-201ENST00000632503 1764 ntBASIC19.62■□□□□ 0.73
SAE1Q9UBE0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAE1Q9UBE0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.61■□□□□ 0.73
SAE1Q9UBE0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SAE1Q9UBE0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 KRT8P11-201ENST00000409686 1436 ntBASIC19.6■□□□□ 0.73
SAE1Q9UBE0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 FAM201B-201ENST00000458407 597 ntBASIC19.6■□□□□ 0.73
SAE1Q9UBE0 AP002982.1-201ENST00000492365 877 ntBASIC19.6■□□□□ 0.73
SAE1Q9UBE0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 AC005082.1-201ENST00000413042 2259 ntBASIC19.6■□□□□ 0.73
SAE1Q9UBE0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAE1Q9UBE0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 AL359736.2-201ENST00000621992 437 ntBASIC19.59■□□□□ 0.73
SAE1Q9UBE0 AC131212.4-201ENST00000623606 975 ntBASIC19.59■□□□□ 0.73
SAE1Q9UBE0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAE1Q9UBE0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms