Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 AL031963.3-201ENST00000606441 850 ntBASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 AL136967.2-201ENST00000623968 743 ntBASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 C8orf49-201ENST00000525043 1968 ntBASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 KRT8P20-201ENST00000423953 1409 ntBASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.61■□□□□ 0.41
CHCHD3Q9NX63 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHCHD3Q9NX63 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD3Q9NX63 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms