Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 SDHAP1-207ENST00000440850 2000 ntBASIC17.59■□□□□ 0.41
HPF1Q9NWY4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPF1Q9NWY4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPF1Q9NWY4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPF1Q9NWY4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.58■□□□□ 0.41
HPF1Q9NWY4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.58■□□□□ 0.41
HPF1Q9NWY4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPF1Q9NWY4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 AC005521.1-201ENST00000393351 872 ntBASIC17.58■□□□□ 0.4
HPF1Q9NWY4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 LIN28AP1-201ENST00000429574 405 ntBASIC17.58■□□□□ 0.4
HPF1Q9NWY4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPF1Q9NWY4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 TMPOP1-202ENST00000424642 1267 ntBASIC17.57■□□□□ 0.4
HPF1Q9NWY4 TSPY21P-201ENST00000433481 731 ntBASIC17.57■□□□□ 0.4
HPF1Q9NWY4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.57■□□□□ 0.4
HPF1Q9NWY4 CA15P1-201ENST00000481698 905 ntBASIC17.57■□□□□ 0.4
HPF1Q9NWY4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPF1Q9NWY4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 TSPY17P-201ENST00000450329 467 ntBASIC17.56■□□□□ 0.4
HPF1Q9NWY4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 AC092865.7-201ENST00000641832 219 ntBASIC17.56■□□□□ 0.4
HPF1Q9NWY4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 AC125437.2-201ENST00000625180 2167 ntBASIC17.56■□□□□ 0.4
HPF1Q9NWY4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPF1Q9NWY4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HPF1Q9NWY4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPF1Q9NWY4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPF1Q9NWY4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPF1Q9NWY4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPF1Q9NWY4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms